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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952722.1_cds_XP_016492253.1_82485
CDS Infomation

[gene=LOC107811777] [db_xref=GeneID:107811777] [protein=RNA pseudouridine synthase 1-like] [protein_id=XP_016492253.1] [location=complement(join(8244..8905,11187..11532))] [gbkey=CDS]
Sequence

ATGACAGTAAAGTTCCCTCTTGGTCAAATACCTTTGCTCAGTTCATCTGGCAGAATCTTC
CGACGCCATCGATTCATCTCCATCATGGCGAACCAAAGAAGCTACTTTGATTCAGCCACA
GCGGCAAACACAAACTACCCAATTCCATTATCTCCGCCAATGCCTGACATATCTAAGGAA
ATAGAGCCGCATAGAGCCTTAACTGCTTCTTCAAAATCCGCTCTTTTTACTCTTTCTAGA
AGCCATGTTATCTTTGAAGATGAATGGCTCATTGCGGTTAATAAGCCCCAAGGAATTTAC
TGTGAGAGTGTTTTGTCTTCACTCCCTGCTTTACTTAAAGACAATGGGGCTAATGTTTCC
GAGCTTCATTTAGCTAATAGACTTGATCGTGATACGAGTGGTGTGATGTTGATTACTAAG
TTGCACAAAGTAGCAGCTAAGTTTGTAAAAGCATTTACAGACCATAAGGTACGGAAAACA
TACCTGGCTTTCTGTGTTGGGCTTGCTCCAAAATGGGAAAAAATAACTGTTAAATCAGGT
CATGGCCGATCAAAATATGGAGCTTGGCGTGTTTATGCTGCATCAGATGTGGGCAGGAAA
CTGCCAGGTGGATCACTTGTTAAAGACATGGAGACCACTTTTGAAGTATTATCAGTGAAC
AGTGGTTTTAAAGAGGTCTCTGACTTACAAAAAGATGAAGCTGTAGTCATAGTTCAAGAG
AAATCAGTCATTGGTTGTGACTTGAAGAACGATGAGATTTTGGTCAGGGCACGCCCTCGA
AGCGGAAGAACACATCAAATTCGCTTGCATTGCCAGTATCTTGGAATTCCTATACGAGGA
GATGTACGATATGAAGGTGTCTATGATTGGAAAGGCAGCAGATATGATGGTCATGATCTT
CATGCAGAAAGTTTATCTTTTGAGCATCCTATTACTGGGAAACCAATCCTGCTTCAGGCA
CCTCCACCTTCGTGGGCTATTCAACCTTTAAGGTCTCAGTTCGAGTAA

Peptide Sequence

PEP ID

XP_016492253.1
PEP Infomation

PREDICTED: RNA pseudouridine synthase 1-like [Nicotiana tabacum]
Sequence

MTVKFPLGQIPLLSSSGRIFRRHRFISIMANQRSYFDSATAANTNYPIPLSPPMPDISKE
IEPHRALTASSKSALFTLSRSHVIFEDEWLIAVNKPQGIYCESVLSSLPALLKDNGANVS
ELHLANRLDRDTSGVMLITKLHKVAAKFVKAFTDHKVRKTYLAFCVGLAPKWEKITVKSG
HGRSKYGAWRVYAASDVGRKLPGGSLVKDMETTFEVLSVNSGFKEVSDLQKDEAVVIVQE
KSVIGCDLKNDEILVRARPRSGRTHQIRLHCQYLGIPIRGDVRYEGVYDWKGSRYDGHDL
HAESLSFEHPITGKPILLQAPPPSWAIQPLRSQFE

Transcript Sequence

Gene sequence data has not been registered.